BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021A10SP1|AL427707
(889 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1333 1714 0.0
>3x_Contig1333
Length = 6390
Score = 1714 bits (860), Expect = 0.0
Identities = 880/890 (98%), Gaps = 1/890 (0%)
Strand = Plus / Plus
Query: 1 ttatgtttcctcacaaacgaaaaamcctattagattgttgggtatgtcaaccgctgtttc 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3333 ttatgtttcctcacaaacgaaaaaacctattagattgttgggtatgtcaaccgctgtttc 3392
Query: 61 aaatgcctttgatatggcaagctggttaggtgttaaaggaaatgggttgtataattttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3393 aaatgcctttgatatggcaagctggttaggtgttaaaggaaatgggttgtataattttcc 3452
Query: 121 ctccagtgttcgtcctgtgcccctaaagatgtatatcgatggattcccagataacctaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3453 ctccagtgttcgtcctgtgcccctaaagatgtatatcgatggattcccagataacctaaa 3512
Query: 181 cttctgtcctttaatgaaaacgatgaataagccggctttcatggccattaaacagcactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3513 cttctgtcctttaatgaaaacgatgaataagccggctttcatggccattaaacagcactc 3572
Query: 241 accggaaaaacctgttctactatttgttgcctctcgtcgtcaaactagattaacagcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3573 accggaaaaacctgttctactatttgttgcctctcgtcgtcaaactagattaacagcttt 3632
Query: 301 agacctaattcatctctgtggtatggaagacaacccacgtagattcttacacatagacga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3633 agacctaattcatctctgtggtatggaagacaacccacgtagattcttacacatagacga 3692
Query: 361 tgaagaagaattgcagttttatatttccaaagtatcagatgatactttaaaattatctct 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3693 tgaagaagaattgcagtattatatttccaaagtatcagatgatactttaaaattatctct 3752
Query: 421 tcaattcggcattggcttacatcatgctggtttgatagamagcgatagagcaatctcgca 480
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 3753 tcaattcggcattggcttacatcatgctggtttgatagaaagcgatagagcaatctcgca 3812
Query: 481 tgaactcttcctaagaagtaaaatacaaattctcgttgctacttcaactttagcttgggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3813 tgaactcttcctaagaagtaaaatacaaattctcgttgctacttcaactttagcttgggg 3872
Query: 541 tgttaaccttcctgcccatttagtcatcattaawggtacacaatttttcgatgcaaagmt 600
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 3873 tgttaaccttcctgcccatttagtcatcattaaaggtacacaatttttcgatgcaaagat 3932
Query: 601 cgaaggttacagagatatggacttaacagatatattgcaaatgatgggtagagcagggag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3933 cgaaggttacagagatatggacttaacagatatattgcaaatgatgggtagagcagggag 3992
Query: 661 acccgcttatgatacttcaggtaccgctattgtgtacacaaaggaatcaaaaaawatgtt 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3993 acccgcttatgatacttcaggtaccgctattgtgtacacaaaggaatcaaaaaaaatgtt 4052
Query: 721 ctacaaacatttcctaaacgttgggtt-cccgttgaatcatctttacacaaagtgcttaa 779
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 4053 ctacaaacatttcctaaacgttgggttccccgttgaatcatctttacacaaagtgcttga 4112
Query: 780 tgatcacatgggtgctgaaatagcatctggtactatatcgactaahcaagaggctcttga 839
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4113 tgatcacatgggtgctgaaatagcatctggtactatatcgactaaacaagaggctcttga 4172
Query: 840 ctttttgaattggactttccttttcaggrgagctcatcataatcctactt 889
|||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4173 ctttttgaattggactttccttttcaggagagctcatcataatcctactt 4222
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5781
Number of Sequences: 1807
Number of extensions: 5781
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 889
length of database: 10,358,551
effective HSP length: 16
effective length of query: 873
effective length of database: 10,329,639
effective search space: 9017774847
effective search space used: 9017774847
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)